Python Guides

Task-oriented recipes. For full API surfaces, see the reference.

• Reading files — read(), MZMLFile, MSZFile
• Working with spectra — Spectrum, Spectra, transforms
• Compressing files — RuntimeArguments, threads, blocksize
• Extracting subsets — index/scan/MS-level filters
• MSZX archives — MSZXBuilder, MSZXFile, create_mszx
• Annotation readers — pepXML, Percolator TSV
• Croissant metadata — ML-ready dataset metadata
• Parquet I/O — from_parquet, to_parquet
• ML dataset adapters — PyTorch, JAX/grain